Cell Culture / Organoids / Liver organoids

Human liver ductal organoid banking protocol

Adult human bile-duct–derived bipotent liver organoids: embed and expand in Huch-type medium (R-spondin / EGF / FGF10 / HGF + nicotinamide / A83-01 / forskolin…), with optional hepatocyte-like differentiation.[1][2]

Use cases

Ductal expansion organoids—not long-term 2D primary hepatocytes and not HCC cell-line spheroids.

UseFitReadoutNotes
Adult liver ductal organoid expansion / disease modelingRecommendedExpansion, genome stability, differentiation[1]Huch system supports long-term expansion and some genetic-disease mirroring.
Tox / metabolism pilots (after differentiation)ContrastAlbumin, CYP, and related functional readoutsExpansion state is not a mature hepatocyte substitute.
HepG2 spheroids as “liver organoids”Do not mixSpheroid diameterCell-line spheroids are not adult ductal organoids.

In one line

Duct-enriched liver tissue → dome → Rspo/EGF/FGF10/HGF niche → brief Y-27632 → mechanical split → CK19/EpCAM → optional hepatocyte differentiation.

Protocol overview

  1. Ethics + cold chain; resection or biopsy liver tissue
  2. Trim fat/necrosis; collagenase ± Dispase; enrich ductal epithelium
  3. Matrix domes; Huch-type medium (Rspo, EGF, FGF10, HGF, nicotinamide, A83-01, forskolin…)[[1]]
  4. Brief Y-27632; score cystic ductal growth
  5. Feed every 2–3 days; mechanical split by growth
  6. CK19 / CK7 / EpCAM; mycoplasma; albumin usually low in expansion
  7. Switch to differentiation conditions only when hepatocyte function is needed[[1]]
  8. In vivo take uses transplant SOPs

Step 1 · Tissue digest

  1. Log site (peripheral parenchyma favors duct enrichment).
  2. Collagenase ± Dispase to clusters; filter and spin.
  3. If bloody, brief RBC lysis (MC427); do not grind to pure single cells.

Steps 2–3 · Expansion niche

  1. Start with a full Huch-type recipe[1].
  2. Mechanical split after cystic structures appear; log passage and matrix lot.
  3. Quarantine immediately if contaminated or mycoplasma-positive.

Steps 4–5 · QC and differentiation

  1. Expansion: CK19 / CK7 / EpCAM; albumin usually modest.
  2. Differentiation: drop expansion keystones; add OSM, dexamethasone etc. per literature—separate dishes (see dedicated section).
  3. In vivo confirmation uses transplant models—not this page.

Niche reagents (titrate)

Literature starting points—not on-site prescribed doses.

ComponentRoleOn-site
Advanced DMEM/F12 + B-27BasalOpen →
R-spondin + EGF + FGF10 + HGFHuch core[1]Open →
烟酰胺 / A83-01 / ForskolinCommon in human liver expansionOpen →
基底膜基质(BME)Dome embeddingOpen →
Y-27632 短期Seeding windowOpen →
红细胞裂解液RBC lysis after bloody digestsOpen →
TrypLE(温和传代备选)Brief single-cell needs; prefer mechanical in expansionOpen →
OSM(分化期)Hepatocyte-like differentiation keystoneOpen →
地塞米松(分化期)Pair with OSM etc.; off in expansionOpen →
VEGF-A(血管共培养扩展)Off in default expansion/diff; endothelial co-culture separateOpen →
胶原酶 II 型Digest tissue/tumor to epithelial clustersOpen →
Dispase IIGentle dissociation with collagenaseOpen →
类器官冻存液Banking cryopreservationOpen →

Expansion vs hepatocyte-like differentiation

Default here is ductal expansion. For hepatocyte function (albumin / CYP…), start separate dishes: withdraw expansion keystones (Rspo/EGF/FGF10/HGF…), then add OSM, dexamethasone, etc. per literature. Do not expand and differentiate in the same dish.

ScenarioNeed CSS?Plan
Long-term expansion, banking, genome editsNoHuch expansion medium; do not maintain on OSM / Dex.
Hepatocyte-like function / tox pilotsYesDifferentiation dish: OSM (MGF30014) + dexamethasone (MC429) titrated to literature; albumin Ab etc. as readout.
Need both expansion and functional readoutYesSplit dishes: one bank in expansion, one switch to differentiation—do not mix media.
  • ·In this section the needCss column means “switch to differentiation medium”, not serum CSS.
  • ·Differentiation windows drift by lot—log OSM / Dex lots and days.
  • ·Low albumin in expansion does not mean banking failed.

Small molecules for this SOP

Deep-links to catalog SKUs; all prices on request. Growth factors (EGF/Noggin/R-spondin, etc.) are proteins—see that category.

CompoundSKURolePrice
Y-27632 2HClMCK1042ROCK block; brief survival boost after seed/splitOn request
A83-01MCK1825ALK4/5/7; limit stromal overgrowthOn request
ForskolinMCK1832Adenylate cyclase; cAMP; common in ovarian recipesOn request
NicotinamideMCK1836Common in human epithelial organoid mediaOn request

Proteins / peptides for this SOP

Growth factors and gastrin deep-linked by SKU; all prices on request. Activity/reconstitution per lot COA.

ProductSKURoleTypePrice
Recombinant Human EGFMGF30001Core epithelial growth factorProteinOn request
Recombinant Human NogginMGF30002BMP antagonist; ENR / PDO niche; dual-SMAD neural inductionProteinOn request
Recombinant Human R-spondin-1MGF30003Wnt amplifier; long-term expansionProteinOn request
Recombinant Human Wnt3aMGF30004Human colon / CRC / ductal / gastric / ovarian / liver WntProteinOn request
Recombinant Human FGF10MGF30007Prostate / pancreas / breast / lung / gastric / ovarian / liver / endometrial / kidney nicheProteinOn request
Recombinant Human HGFMGF30010Human liver ductal organoid keystoneProteinOn request
Recombinant Human IGF-1MGF30013Seen in some epithelial / breast / liver recipesProteinOn request
Recombinant Human Oncostatin MMGF30014Keystone for hepatocyte-like differentiation of liver organoidsProteinOn request
Recombinant Human VEGF-AMGF30015Vascular / endothelial co-culture extension; usually off in default epithelial PDO mediaProteinOn request

QC antibodies for this SOP

Common IHC/IF markers before banking or drugs; deep-linked catalog antibodies. Dilution/species per datasheet.

MarkerProductSKURole
CK19Cytokeratin 19 AntibodyMCAB5312Ductal-like epithelium; pancreas, some lung / ovarian / bladder / HNC
EpCAMEPCAM AntibodyMCAB5377Pan-epithelial; multi-tissue PDO
CK7Cytokeratin 7 AntibodyMCAB5547Cholangiocyte / urothelial / some tubular / esophageal / thyroid / mesothelial epithelium QC
AlbuminAlbumin (MXB14128) Rabbit mAbMDAB15418Hepatocyte-like differentiation readout (often low in expansion)
Ki-67Ki67 Rabbit mAbB10315Proliferation index; pre/post-drug contrast

Culture supplements for this SOP

Existing cell-culture SKUs (B-27 / N-2 / glutamine / antibiotics); titrate per insert and literature.

ProductSKURole
Advanced DMEM/F12 MediumMC410Serum-free organoid basal medium
B-27 Supplement (50×)MC317Serum-free basal supplement for epithelial / neural organoids
N-2 Supplement (100×)MC318Neural / some epithelial recipes; use with or vs B-27 by system
Stable glutamine (Ala-Gln, 200 mM)MC301Glutamine source for Advanced DMEM/F12 systems
Penicillin-Streptomycin (100×)MC306Early banking sterility; consider withdrawal after lines stabilize
ITS Supplement (100×)MC311Insulin–transferrin–selenium; some epithelial recipes
Organoid Basement Membrane Extract (BME)MC4113D dome / sandwich embedding
Collagenase Type IIMC412Digest tissue/tumor to epithelial clusters
Dispase IIMC413Gentle dissociation with collagenase
Accutase Cell Detachment SolutionMC414Optional gentle enzymatic passaging
Organoid Cryopreservation MediumMC415Banking cryopreservation
Mycoplasma Detection KitMC416Pre-banking sterility QC
HEPES Buffer (1 M)MC305Organoid medium buffering; add to final concentration per recipe
Collagenase Type IVMC421Dissociation alternative; contrast with Type II
Organoid Primary Antimicrobial (Primocin-class)MC423Early primary / PDO / PSC banking contamination control
Ultra-Low Attachment 96-Well PlateMC425EB formation / spheroids / drug plates
U-Bottom 96-Well PlateMC430Spheroid settling / co-culture plates; complements ULA
TrypLE Express EnzymeMC426Gentle PSC / organoid passaging alternative
RBC Lysis BufferMC427RBC removal after bloody digests
DexamethasoneMC429Glucocorticoid for hepatocyte-like differentiation

References

  1. [1] Long-term culture of genome-stable bipotent stem cells from adult human liver. Cell. 2015. PMID 25533785
  2. [2] In vitro expansion of single Lgr5+ liver stem cells induced by Wnt-driven regeneration. Nature. 2013. PMID 24332895
  3. [3] Human hepatic organoids for the analysis of human genetic diseases. JCI Insight. 2017. PMID 28218919
Disclaimer: Research use only (RUO). Not clinical guidance or an institutional SOP. Human tissue requires ethics approval. Inline [n] maps to the reference list. Titrate concentrations and digest times locally.