Cell Culture / Organoids / Skin organoids

Skin / epidermal organoid protocol

Human epidermal stem-cell expansion and air–liquid interface (ALI) stratification outline: expand in a serum-free epidermal niche (EGF / FGF / Noggin / R-spondin…), then optionally switch to ALI for barrier / stratification readouts; PSC hair-bearing skin organoids are a long-cycle contrast—not the default one-week banking recipe.[1][2]

Use cases

Epidermal organoids / ALI—not a plain HaCaT monolayer and not the default 130-day PSC hair-skin course.

UseFitReadoutNotes
Primary epidermal organoid expansion + infection / barrier studiesRecommendedStratification markers, barrier function, infection readouts[1]Serum-free recipes cut lot noise; log ALI vs expansion phases separately.
PSC hair-bearing skin organoids (long cycle)ContrastHair follicles / appendages[2]Cycles can run tens to >100 days; bank separately from primary expansion.
HaCaT monolayers as skin organoidsDo not mix2D confluence2D keratinocyte lines are not 3D epidermal organoids.

In one line

Epidermal cells → serum-free niche expansion → optional ALI stratification → CK/barrier readout; PSC hair route as long-cycle contrast.

Protocol overview

  1. Ethics + cold chain; log site (foreskin / trunk…) and donor metadata
  2. Isolate epidermal cells; titrate collagenase / Dispase to clusters or primary keratinocytes
  3. Expand in serum-free epidermal niche (EGF, FGF, Noggin, R-spondin, A83-01…)[[1]]
  4. Brief Y-27632 at seeding; log passage and matrix / insert lot
  5. Optional: switch to air–liquid interface (ALI) for stratification and barrier readouts
  6. EpCAM / CK / E-Cadherin; mycoplasma; infection or drug arms with controls
  7. PSC hair-bearing long-cycle routes are contrast only[[2]]—do not mix with this expansion SOP

Step 1 · Epidermal isolation

  1. Log donor metadata by site; aseptic harvest.
  2. Titrate Dispase / collagenase to literature; prefer basal-layer recovery.
  3. Do not over-digest to debris.

Steps 2–3 · Expansion and optional ALI

  1. Start with a serum-free epidermal niche[1]; log factor lots.
  2. Switch to ALI only when stratification / barrier readouts are needed—do not mix with expansion media lots.
  3. Mechanical or gentle enzymatic splits; log passage.

Steps 4–5 · QC and extensions

  1. EpCAM / CK / E-Cadherin; mycoplasma.
  2. Infection / drug arms with controls; interpret vs histology.
  3. PSC hair-bearing routes need a separate timeline[2].

Niche reagents (titrate)

Literature starting points—not on-site prescribed doses.

ComponentRoleOn-site
EGF + Noggin + R-spondin ± FGFEpidermal expansion core[1]Open →
A83-01 / Forskolin(按文献)Common in human epidermal recipesOpen →
B-27 / N-2Serum-free supplementsOpen →
Y-27632 短期Seeding windowOpen →
超低吸附板(EB / 聚集体对照)Optional for PSC aggregate routesOpen →
胶原酶 II 型Digest tissue/tumor to epithelial clustersOpen →
Dispase IIGentle dissociation with collagenaseOpen →
类器官冻存液Banking cryopreservationOpen →

Small molecules for this SOP

Deep-links to catalog SKUs; all prices on request. Growth factors (EGF/Noggin/R-spondin, etc.) are proteins—see that category.

CompoundSKURolePrice
Y-27632 2HClMCK1042ROCK block; brief survival boost after seed/splitOn request
SB 202190MCK1279p38 block; human epithelial organoid stabilityOn request
A83-01MCK1825ALK4/5/7; limit stromal overgrowthOn request
ForskolinMCK1832Adenylate cyclase; cAMP; common in ovarian recipesOn request
All-trans Retinoic Acid (ATRA)MCK1837Lung airway–alveolar bias windows; usually off in default expansionOn request
NicotinamideMCK1836Common in human epithelial organoid mediaOn request

Proteins / peptides for this SOP

Growth factors and gastrin deep-linked by SKU; all prices on request. Activity/reconstitution per lot COA.

ProductSKURoleTypePrice
Recombinant Human EGFMGF30001Core epithelial growth factorProteinOn request
Recombinant Human NogginMGF30002BMP antagonist; ENR / PDO niche; dual-SMAD neural inductionProteinOn request
Recombinant Human R-spondin-1MGF30003Wnt amplifier; long-term expansionProteinOn request
Recombinant Human Wnt3aMGF30004Human colon / CRC / ductal / gastric / ovarian / liver WntProteinOn request
Recombinant Human FGF2MGF30006Prostate niches; also common in brain / PSC inductionProteinOn request
Recombinant Human FGF10MGF30007Prostate / pancreas / breast / lung / gastric / ovarian / liver / endometrial / kidney nicheProteinOn request

QC antibodies for this SOP

Common IHC/IF markers before banking or drugs; deep-linked catalog antibodies. Dilution/species per datasheet.

MarkerProductSKURole
EpCAMEPCAM AntibodyMCAB5377Pan-epithelial; multi-tissue PDO
E-CadherinE Cadherin AntibodyMCAB1155Epithelial integrity / EMT contrast

Culture supplements for this SOP

Existing cell-culture SKUs (B-27 / N-2 / glutamine / antibiotics); titrate per insert and literature.

ProductSKURole
Advanced DMEM/F12 MediumMC410Serum-free organoid basal medium
B-27 Supplement (50×)MC317Serum-free basal supplement for epithelial / neural organoids
N-2 Supplement (100×)MC318Neural / some epithelial recipes; use with or vs B-27 by system
Stable glutamine (Ala-Gln, 200 mM)MC301Glutamine source for Advanced DMEM/F12 systems
Penicillin-Streptomycin (100×)MC306Early banking sterility; consider withdrawal after lines stabilize
Organoid Basement Membrane Extract (BME)MC4113D dome / sandwich embedding
Collagenase Type IIMC412Digest tissue/tumor to epithelial clusters
Dispase IIMC413Gentle dissociation with collagenase
Accutase Cell Detachment SolutionMC414Optional gentle enzymatic passaging
Organoid Cryopreservation MediumMC415Banking cryopreservation
Mycoplasma Detection KitMC416Pre-banking sterility QC
HEPES Buffer (1 M)MC305Organoid medium buffering; add to final concentration per recipe
Collagenase Type IVMC421Dissociation alternative; contrast with Type II
Organoid Primary Antimicrobial (Primocin-class)MC423Early primary / PDO / PSC banking contamination control
Ultra-Low Attachment 96-Well PlateMC425EB formation / spheroids / drug plates
U-Bottom 96-Well PlateMC430Spheroid settling / co-culture plates; complements ULA
Keratinocyte Serum-Free Medium (KSFM)MC428Prostate CSS-style recipes; optional contrast for skin / epidermis

References

  1. [1] Human primary epidermal organoids enable modeling of dermatophyte infections. Cell Death Dis. 2021. PMID 33414472
  2. [2] Generation and characterization of hair-bearing skin organoids from human pluripotent stem cells. Nat Protoc. 2022. PMID 35322210
Disclaimer: Research use only (RUO). Not clinical guidance or an institutional SOP. Human tissue requires ethics approval. Inline [n] maps to the reference list. Titrate concentrations and digest times locally.