PI3K/Akt/mTOR signaling pathway

Class I PI3Ks generate PIP3 from PIP2, recruiting PH-domain proteins including PDK1 and Akt. Dual phosphorylation (Thr308/Ser473) enables Akt to phosphorylate TSC2 and other nodes, relieving Rheb inhibition on mTORC1 to drive p70S6K/4E-BP1–controlled translation and growth. mTORC2 contributes to Akt Ser473 and cytoskeletal/metabolic programs. The axis crosstalks extensively with RTK–Ras–MAPK, AMPK, autophagy, and immune metabolism—central in cancer, metabolic disease, and therapy design.

1. Key targets

Human gene symbols (HGNC) along the PI3K–PIP3–PDK1/Akt–TSC–Rheb–mTORC1/2–translation/autophagy axis. Includes class I–III PI3Ks, PIP₃ phosphatases, Akt/mTOR complexes, nutrient sensing (Rag/Ragulator, GATOR), translation machinery, ULK–AMPK crosstalk, and upstream insulin/IGF, representative RTKs, and Ras–MAPK bypass nodes. Mind splice isoforms and tissue expression—annotate with databases/papers.

1.1 PI3Ks & lipid kinases

Class I makes PIP₃; class II/III remodel membrane lipids and crosstalk with RTKs, endosomes, and autophagy.

Class IA catalytic hubs:PIK3CA·PIK3CB

Class II catalytic hubs:PIK3C2A·PIK3C2B·PIK3C2G

Class I PI3K (catalytic & regulatory subunits)

PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R4, PIK3AP1

Class II PI3K (PIP/PIP2 kinases; RTK/trafficking crosstalk)

PIK3C2A, PIK3C2B, PIK3C2G

Class III PI3K (Vps34 complex; autophagy/endosome crosstalk)

PIK3C3, VPS15, NRBF2, BECN1, ATG14, UVRAG, RUBCN, RUBCNL, SH3GLB1

1.2 PIP₃ / inositol phosphatases & Akt-directed phosphatases

PTEN/INPP family lipids phosphatases; PHLPP/PP2A modules dephosphorylate Akt/mTOR sites.

PIP₃ / inositol lipid phosphatases (negative regulation)

PTEN, TPTE, TPTE2, INPP4A, INPP4B, INPP5D, INPP5E, INPP5F, INPP5J, SYNJ1, SYNJ2, OCRL, INPPL1, PLCH1, PLCH2

Akt / mTOR-directed phosphatases & PP2A subunits (selected)

PHLPP1, PHLPP2, PPP2CA, PPP2CB, PPP2R1A, PPP2R1B, PPP2R2A, PPP2R2B, PPP2R2C, PPP2R2D, PPP2R3A, PPP2R3B, PPP2R3C, PPP2R5A, PPP2R5B, PPP2R5C, PPP2R5D, PPP2R5E

1.3 PDK1, Akt & canonical outputs

Includes selected AGC kinases that parallel or feedback onto mTOR/S6K programs.

PDK1 & Akt (PKB) family

PDPK1, AKT1, AKT2, AKT3

Canonical Akt substrates & effectors (selected)

FOXO1, FOXO3, FOXO4, GSK3A, GSK3B, BAD, CASP9, MDM2, XIAP, CDKN1A, CDKN1B, NOS3, TSC2, TSC1, IKBKB, CHUK, IKBKG, NFKBIA, RELA, CREB1, CRTC1, CRTC2, CRTC3

AGC kinases parallel / intersecting Akt–mTOR

S6K (RPS6KB1/2) is listed under the S6K/S6 block.

SGK1, SGK2, SGK3, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB, PRKCD, PRKCE, PRKCG, PRKCI, PRKCZ

1.4 TSC–Rheb & amino-acid–mTORC1 recruitment

TSC complex & Rheb

TSC1, TSC2, TBC1D7, RHEB, RHEBL1

Rag GTPases & Ragulator (amino-acid–dependent mTORC1 recruitment)

RRAGA, RRAGB, RRAGC, RRAGD, LAMTOR1, LAMTOR2, LAMTOR3, LAMTOR4, LAMTOR5

GATOR / CASTOR / Sestrin (amino-acid & stress sensing, selected)

DEPDC5, NPRL2, NPRL3, MIOS, WDR24, WDR59, SEH1L, SEC13, CASTOR1, CASTOR2, SESN1, SESN2, SESN3

1.5 mTORC1/2 & rapamycin-binding proteins

mTORC1 core components

MTOR, RPTOR, MLST8, AKT1S1, DEPTOR, TELO2, TTI1, TTI2, NRBF2

mTORC2 core components

MTOR, RICTOR, MAPKAP1, MLST8, PRR5, PRR5L, DEPTOR

FKBP & rapamycin-binding partners

FKBP1A, FKBP1B, FKBP2, FKBP3, FKBP4, FKBP5, FKBP6, FKBP7, FKBP8, FKBP9, FKBP10, FKBP11, FKBP15

1.6 mTORC1 translation outputs (S6K, 4E-BP, eIF4F, MNK/RSK)

S6K & ribosomal protein S6 axis

RPS6KB1, RPS6KB2, RPS6

MNK, p90 RSK, LARP1 & translation elongation control

MKNK1, MKNK2, MAPKAPK2, MAPKAPK3, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA4, RPS6KA5, RPS6KA6, LARP1, PDCD4, EIF4ENIF1

1.7 Autophagy initiation, AMPK & DDR kinases (crosstalk)

ULK complex (mTORC1-repressed autophagy initiation)

ULK1, ULK2, ATG13, RB1CC1, ATG101

AMPK & LKB1 (energy stress antagonism of mTORC1)

STK11, STRADA, STRADB, CAB39, CAB39L, PRKAA1, PRKAA2, PRKAB1, PRKAB2, PRKAG1, PRKAG2, PRKAG3

DNA-PK & DDR kinases (Akt cross-phosphorylation, model-dependent)

PRKDC, ATM, ATR, CHEK1, CHEK2

1.8 Upstream: insulin/IGF, RTKs, Ras–MAPK

Insulin / IGF-1 receptors & IRS scaffolds

INSR, IGF1R, INSRR, IRS1, IRS2, IRS4

Major receptor tyrosine kinases (selected)

Large RTK gene set; representative PI3K-coupled RTKs—see HGNC / Reactome RTK modules for full lists.

EGFR, ERBB2, ERBB3, ERBB4, PDGFRA, PDGFRB, KIT, FLT1, FLT3, FLT4, KDR, MET, ALK, ROS1, RET, FGFR1, FGFR2, FGFR3, FGFR4, NTRK1, NTRK2, NTRK3, DDR1, DDR2, EPHA1, EPHA2, EPHA3, EPHA4, EPHA5, EPHA6, EPHA7, EPHA8, EPHA10, EPHB1, EPHB2, EPHB3, EPHB4, EPHB6

Ras / MAPK & adaptors (RTK→PI3K bypass)

HRAS, KRAS, NRAS, MRAS, RRAS, RRAS2, GRB2, GAB1, GAB2, SHC1, SHC2, SHC3, SHC4, SOS1, SOS2, PTPN11, BRAF, RAF1, MAP2K1, MAP2K2, MAPK1, MAPK3

Core concepts (quick recap)

  • PIP₃ recruits PH-domain proteins (PDK1, Akt) to membranes for dual phosphorylation and branch signaling.
  • TSC complex is a Rheb GAP; Akt-driven TSC2 phosphorylation relieves Rheb inhibition on mTORC1.
  • mTORC2 supports Akt Ser473 and some PKCs; ULK/AMPK antagonize mTORC1 under nutrient/energy stress.

2. Suggested experimental readouts

Pair phospho readouts with totals and stimulation/inhibitor controls; PI3K isoform vs pan-AKT probes differ—annotate PIK3CA/PIK3CB/PTEN context.

  • p-AKT Ser473 / Thr308; total AKT1/2/3
  • p-S6K1 Thr389, p-RPS6 Ser235/236, p-4E-BP1 Thr37/46 (clone-dependent)
  • p-PRAS40, mTOR Ser2448 (mind feedback phosphorylation)
  • PTEN localization/loss (IHC / sequencing)
  • Pair with p-ERK1/2 to assess Ras–MAPK bypass

3. mTOR complexes at a glance

ComplexScaffoldKey outputsNotes
mTORC1Raptor / mLST8 / DEPTOR…S6K1, 4E-BP1, ULK1 抑制(自噬起始)Rapamycin-sensitive (4E-BP1 may need chronic blockade).
mTORC2Rictor / mSin1 / mLST8…Akt Ser473、部分 PKC 亚型First-gen rapalogs incompletely mirror mTORC2 loss.

4. Cancer, metabolism & immunity

  • Cancer: PIK3CA hotspot/amplified lesions; context-dependent PIK3CB (p110β) addiction; PTEN loss and AKT hyperactivation are frequent—watch RTK feedback and stress bypasses.
  • Metabolism: Insulin–IRS–PI3K (PIK3CA/PIK3CB) controls GLUT4 and lipogenesis; AMPK antagonism/cooperation sets anabolic flux.
  • Immunity: PI3Kδ/γ bias in leukocyte signaling; intersects checkpoint biology in the TME.

PI3K/Akt/mTOR–related antibodies (curated)

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5. Product lines & on-site search

Primary & phospho antibodies

PI3K p110α/δ, PTEN, p-AKT (Ser473/Thr308), p-mTOR, p-S6K1, 4E-BP1, Rictor, Raptor, TSC2—WB/IHC/IF/FC as applicable.

Small molecules & probes

PI3K, Akt, and ATP-competitive mTOR inhibitors (availability-dependent)—research use per datasheets/ethics.

6. Inhibitors & tool compounds (summary)

For research use; IC50 values are indicative—validate in your system.

LY294002

Pan-PI3K tool inhibitor (historical benchmark).

GDC-0941 / Buparlisib

Class I PI3K inhibitors (clinical/preclinical contexts).

MK-2206

Allosteric pan-Akt inhibitor.

AZD5363

ATP-competitive Akt inhibitor (isoform profile per datasheet).

Rapamycin (Sirolimus)

FKBP12–mTORC1 canonical rapalog.

Everolimus / Temsirolimus

Oral rapalogs; common mTORC1 positive controls.

BEZ235 (Dactolisib)

Dual PI3K/mTOR blockade—mind off-targets.

Torin1

ATP-competitive mTOR inhibitor; broader mTORC1 outputs vs rapamycin.

7. Pathway schematic

PI3K / Akt / mTOR backbone schematic
PI3K/Akt/mTOR pathway schematic
Legend
  1. RTK/GPCR inputs activate class I PI3K
  2. PIP3 recruits PDK1 and Akt
  3. Akt restrains TSC—Rheb licenses mTORC1
  4. mTORC1 drives S6K/4E-BP1; feedback reshapes receptor signaling

8. Pathway biology overview

PI3K/Akt/mTOR couples growth factors, nutrients, and anabolism: homeostatic roles in tissue maintenance and insulin sensitivity become oncogenic when amplified or PTEN-brakes are lost—driving translation, lipid, and glycolytic programs. Combination strategies must anticipate feedback (RTK, MAPK, ER stress) and immune/metabolic toxicities.

  • AMPK and mTORC1 antagonize under energy stress
  • Autophagy initiation is gated by mTORC1–ULK1 phosphorylation states

11. References

PI3K family & lipid signaling

  • • Vanhaesebroeck B, et al. (2010). Science. 328(5977):1664-7.
  • • Engelman JA, et al. (2006). Nature. 441(7092):424-30.

Akt/mTOR in disease

  • • Fruman DA, et al. (2017). Nat Rev Cancer. 17(3):149-162.
  • • Manning BD, Toker A. (2017). Cell. 169(3):381-405.

Targeting & medicinal chemistry

  • • Liu Y, et al. (2020). Cancer Lett. 480:148-156.
  • • Laplante M, Sabatini DM. (2012). Cell. 149(2):274-93.